Structure of PDB 5ysr Chain B

Receptor sequence
>5ysrB (length=252) Species: 83333 (Escherichia coli K-12) [Search protein sequence]
ALDLGSAEAKAWIGVENPHRADVLTELRRSTVARVCTGRAGPRPRTQALL
RFLADHSRSKDTVLKEVPEEWVKAQGLLEVRSEISDKNLYLTRPDMGRRL
CAEAVEALKAQCVANPDVQVVISDGLSTDAITVNYEEILPPLMAGLKQAG
LKVGTPFFVRYGRVKIEDQIGEILGAKVVILLVGERPGLGQSESLSCYAV
YSPRMATTVEADRTCISNIHQGGTPPVEAAAVIVDLAKRMLEQKASGINM
TR
3D structure
PDB5ysr Direct Participation of a Peripheral Side Chain of a Corrin Ring in Coenzyme B12Catalysis.
ChainB
Resolution2.05 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.3.1.7: ethanolamine ammonia-lyase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 B12 B L169 R206 V207 K208 E228 R229 Y241 E253 R256 C258 S260 N261 L126 R163 V164 K165 E185 R186 Y198 E210 R213 C215 S217 N218
Gene Ontology
Molecular Function
GO:0008851 ethanolamine ammonia-lyase activity
GO:0016829 lyase activity
GO:0031419 cobalamin binding
Biological Process
GO:0006520 amino acid metabolic process
GO:0046336 ethanolamine catabolic process
Cellular Component
GO:0009350 ethanolamine ammonia-lyase complex
GO:0031469 bacterial microcompartment
GO:0031471 ethanolamine degradation polyhedral organelle

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5ysr, PDBe:5ysr, PDBj:5ysr
PDBsum5ysr
PubMed29797764
UniProtP19636|EUTC_ECOLI Ethanolamine ammonia-lyase small subunit (Gene Name=eutC)

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