Structure of PDB 5ysf Chain B

Receptor sequence
>5ysfB (length=389) Species: 272626 (Listeria innocua Clip11262) [Search protein sequence]
SKVLNVWAMGDEAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLTAVA
SKSGPDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTT
QFDGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSDAALKLSKR
GKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGTPVFNKKPFVDTVTYLD
SFIKNGSAPDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDTAPDIDGK
WATAVLPKKENNESSLGGANLSIFKYSNKKDDALKFMDYMSQPDVQLSWL
KDTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLY
GKSWEQIYRGGADVQTQMDTFNDQVEALLKKLEHHHHHH
3D structure
PDB5ysf Structural and thermodynamic insights into beta-1,2-glucooligosaccharide capture by a solute-binding protein inListeria innocua.
ChainB
Resolution1.9 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC B S265 W268 S232 W235
BS02 BGC B W71 D193 N195 Q197 W38 D160 N162 Q164
BS03 BGC B E45 W71 Y145 W268 E12 W38 Y112 W235
BS04 BGC B W71 G94 T95 T96 W97 E147 G301 W38 G61 T62 T63 W64 E114 G268
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:1901982 maltose binding
Biological Process
GO:0015768 maltose transport
GO:0042956 maltodextrin transmembrane transport
Cellular Component
GO:0055052 ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5ysf, PDBe:5ysf, PDBj:5ysf
PDBsum5ysf
PubMed29678880
UniProtQ92AS8

[Back to BioLiP]