Structure of PDB 5yrm Chain B

Receptor sequence
>5yrmB (length=142) Species: 113549 (Pteria penguin) [Search protein sequence]
PVASEYLGGPGGDAFDDKALAQNGDITRIEMQCTDVATYIKLRYGKVDSR
QWGWANENCIQWSKKGVKVVHELSSGEYITSAIVTYGKYVQSITFKTNKR
TLPRCGTSATEKSVTVLIPGGLKYISGRWGCRIDGLRFHAKC
3D structure
PDB5yrm Structures of jacalin-related lectin PPL3 regulating pearl shell biomineralization
ChainB
Resolution1.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 BGC B W81 Y108 W62 Y89
BS02 GLC B G30 G31 G149 C150 R151 D153 G11 G12 G130 C131 R132 D134
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding

View graph for
Molecular Function
External links
PDB RCSB:5yrm, PDBe:5yrm, PDBj:5yrm
PDBsum5yrm
PubMed29524263
UniProtA0A2Z5V8U8

[Back to BioLiP]