Structure of PDB 5yo9 Chain B

Receptor sequence
>5yo9B (length=366) Species: 470 (Acinetobacter baumannii) [Search protein sequence]
GIRITGTGLFHPTEIISNEELADSLNAYVEQYNQENAEKIAAGELEELRG
SSAEFIEKASGIKRRYVIEKSGILDPTRLRPRLSERSNDELSIQAEWGVI
AAKQAMENAGVTAEDIDVVILACSNMQRAYPAVAIEIQSALGIQGYAYDM
NVAASAATFGLKQAADAIRSGARRVLLVNVEITSGHLDYRNRDCHFIFGD
VATASIIEETTTKTGFEILDIHLFTQFSNNIRNNFGFLNRSEDAVVDDKL
FRQDGRKVFKDVCPLVAKIINAQLEKMQLTANDIKRFWLHQANANMNELI
LKYVAGKDADLSRAPIILDEFANTSSAGVIIALHRTGHEVDDGEYGVISS
FGAGYSVGSIVVQKHV
3D structure
PDB5yo9 Crystal structure of a novel KAS III from Acinetobacter baumannii
ChainB
Resolution2.002 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.3.1.180: beta-ketoacyl-[acyl-carrier-protein] synthase III.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 COA B S52 F56 R193 G256 R257 V259 F260 C264 N294 M297 S51 F55 R192 G255 R256 V258 F259 C263 N293 M296
Gene Ontology
Molecular Function
GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity
GO:0016746 acyltransferase activity
GO:0033818 beta-ketoacyl-acyl-carrier-protein synthase III activity
GO:0061990 beta-ketodecanoyl-[acyl-carrier-protein] synthase activity
Biological Process
GO:0006633 fatty acid biosynthetic process
GO:0044550 secondary metabolite biosynthetic process

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Molecular Function

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Biological Process
External links
PDB RCSB:5yo9, PDBe:5yo9, PDBj:5yo9
PDBsum5yo9
PubMed
UniProtV5VGF8

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