Structure of PDB 5ynj Chain B

Receptor sequence
>5ynjB (length=124) Species: 1235996 (Human betacoronavirus 2c EMC/2012) [Search protein sequence]
FASNSSVLSLVNFTVDPQKAYLDFVNAGGAPLTNCVKMLTPKTGTGIAIS
VKPESTADQETYGGASVCLYCRAHIEHPDVSGVCKYKGKFVQIPAQCVRD
PVGFCLSNTPCNVCQYWIGYGCNC
3D structure
PDB5ynj Structural insights into the molecular mechanism of MERS Coronavirus RNA ribose 2'-O-methylation by nsp16/nsp10 protein complex
ChainB
Resolution2.043 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.19.12: ubiquitinyl hydrolase 1.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C74 C77 H83 C90 C68 C71 H77 C84
BS02 ZN B C117 C120 C128 C111 C114 C122
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0008270 zinc ion binding
Biological Process
GO:0019079 viral genome replication

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Molecular Function
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Biological Process
External links
PDB RCSB:5ynj, PDBe:5ynj, PDBj:5ynj
PDBsum5ynj
PubMed
UniProtK4LC41

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