Structure of PDB 5yni Chain B

Receptor sequence
>5yniB (length=120) Species: 1235996 (Human betacoronavirus 2c EMC/2012) [Search protein sequence]
SSVLSLVNFTVDPQKAYLDFVNAGGAPLTNCVKMLTPKTGTGIAISVKPE
STADQETYGGASVCLYCRAHIEHPDVSGVCKYKGKFVQIPAQCVRDPVGF
CLSNTPCNVCQYWIGYGCNC
3D structure
PDB5yni Structural insights into the molecular mechanism of MERS Coronavirus RNA ribose 2'-O-methylation by nsp16/nsp10 protein complex
ChainB
Resolution2.07 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.19.12: ubiquitinyl hydrolase 1.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C74 C77 H83 C90 C64 C67 H73 C80
BS02 ZN B C117 C120 C128 C107 C110 C118
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0008270 zinc ion binding
Biological Process
GO:0019079 viral genome replication

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Molecular Function
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Biological Process
External links
PDB RCSB:5yni, PDBe:5yni, PDBj:5yni
PDBsum5yni
PubMed
UniProtK4LC41

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