Structure of PDB 5yng Chain B

Receptor sequence
>5yngB (length=146) Species: 1833 (Rhodococcus erythropolis) [Search protein sequence]
KIEQPRWASKDSAAGAASTPDEKIVLEFMDALTSNDAAKLIEYFAEDTMY
QNMPLPPAYGRDAVEQTLAGLFTVMSYDAVETFHIGSSNGLVYTERVDVL
RALPTGKSYNVSVLGVFQLTEGKITGWRDYFDLREFEEAVDLPLRG
3D structure
PDB5yng Structural and Computational Insight into the Catalytic Mechanism of Limonene Epoxide Hydrolase Mutants in Stereoselective Transformations.
ChainB
Resolution2.497 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) Y53 N55 R99 D101 D132
Catalytic site (residue number reindexed from 1) Y50 N52 R96 D98 D129
Enzyme Commision number 3.3.2.8: limonene-1,2-epoxide hydrolase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 3ZS B N55 M78 L103 F134 N52 M75 L100 F131
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0018744 limonene-1,2-epoxide hydrolase activity

View graph for
Molecular Function
External links
PDB RCSB:5yng, PDBe:5yng, PDBj:5yng
PDBsum5yng
PubMed29232125
UniProtQ9ZAG3|LIMA_RHOER Limonene-1,2-epoxide hydrolase (Gene Name=limA)

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