Structure of PDB 5ynb Chain B

Receptor sequence
>5ynbB (length=122) Species: 1235996 (Human betacoronavirus 2c EMC/2012) [Search protein sequence]
NSSVLSLVNFTVDPQKAYLDFVNAGGAPLTNCVKMLTPKTGTGIAISVKP
ESTADQETYGGASVCLYCRAHIEHPDVSGVCKYKGKFVQIPAQCVRDPVG
FCLSNTPCNVCQYWIGYGCNCD
3D structure
PDB5ynb Structural insights into the molecular mechanism of MERS Coronavirus RNA ribose 2'-O-methylation by nsp16/nsp10 protein complex
ChainB
Resolution1.98 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.19.12: ubiquitinyl hydrolase 1.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B C74 C77 H83 C90 C65 C68 H74 C81
BS02 ZN B C117 C120 C128 C130 C108 C111 C119 C121
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0008270 zinc ion binding
Biological Process
GO:0019079 viral genome replication

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Molecular Function
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Biological Process
External links
PDB RCSB:5ynb, PDBe:5ynb, PDBj:5ynb
PDBsum5ynb
PubMed
UniProtK4LC41

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