Structure of PDB 5ybt Chain B

Receptor sequence
>5ybtB (length=295) Species: 104259 (Penicillium brasilianum) [Search protein sequence]
VPRGSHMPPRLQRFPATASADEIFAAFQEDGCVVIEGFISPEQVARFSQE
VDPAMEKIPVEVTNGNSNDRTKRFSKCVIASPTFRNEIIESDLMHELCDR
VFSKPGEGMGYHFNDNMVIEVQPGAPAQRLHRDQELYPWWNSMGPAGPEC
LINFFCAVTPFTEENGATRLVPGSHLWPEFTQINERDCPQFGKIETVPAI
MQPGDCYLMSGKVIHGAGHNATTTDRRRALALSIIRRELRPVQAFSLSVP
MKLAREMSERSQTMFGFRSSVQHCDMVHFWGNDGKDIAHHLGLIS
3D structure
PDB5ybt Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
ChainB
Resolution2.35 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.14.11.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 8TC B D276 M277 V278 D275 M276 V277
BS02 FE B H130 D132 H214 H131 D133 H215
BS03 AKG B I118 Q127 H130 F154 T167 H214 A216 R226 I119 Q128 H131 F155 T168 H215 A217 R227
BS04 8TC B S66 R72 M116 Q127 H130 D132 N152 S232 S67 R73 M117 Q128 H131 D133 N153 S233
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0016114 terpenoid biosynthetic process
GO:0140874 paraherquonin biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5ybt, PDBe:5ybt, PDBj:5ybt
PDBsum5ybt
PubMed29317628
UniProtA0A1E1FFL0|PRHA_PENBI Multifunctional dioxygenase prhA (Gene Name=prhA)

[Back to BioLiP]