Structure of PDB 5ybq Chain B

Receptor sequence
>5ybqB (length=288) Species: 104259 (Penicillium brasilianum) [Search protein sequence]
GLVPRGSHMPRLQRFPATASADEIFAAFQEDGCVVIEGFISPEQVARFSQ
EVDPAMEKIPVEVTNNGNSNDRTKRFSKCVIASPTFRNEIIESDLMHELC
DRVFSKPGEGMGYHFNDNMVIEVQPGAPAQRLHRDQELYPWWNSMGPAGP
ECLINFFCAVTPFTEENGATRLVPGSHLWPEFTQINERDCPQFGKIETVP
IMQPGDCYLMSGKVIHGAGHNATTTDRRRALALSIIRRELRPMQAFSLSV
PMKLAREMSERSQTMFGFRSSVFWGNDGKDIAHHLGLI
3D structure
PDB5ybq Structure function and engineering of multifunctional non-heme iron dependent oxygenases in fungal meroterpenoid biosynthesis.
ChainB
Resolution2.25 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number 1.14.11.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FE B H130 D132 H214 H133 D135 H216
BS02 AKG B Q127 F154 T167 H214 A216 R226 Q130 F157 T170 H216 A218 R228
BS03 8T0 B N67 R72 M116 Q127 H130 D132 L150 S232 M241 N70 R75 M119 Q130 H133 D135 L153 S234 M243
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:0051213 dioxygenase activity
Biological Process
GO:0016114 terpenoid biosynthetic process
GO:0140874 paraherquonin biosynthetic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5ybq, PDBe:5ybq, PDBj:5ybq
PDBsum5ybq
PubMed29317628
UniProtA0A1E1FFL0|PRHA_PENBI Multifunctional dioxygenase prhA (Gene Name=prhA)

[Back to BioLiP]