Structure of PDB 5yax Chain B

Receptor sequence

>5yaxB (length=230) Species: 9606 (Homo sapiens) [Search protein sequence]

QVQLQQSGPGLVKPSQTLSLTCGISGDSVSSKSAAWNWIRQSPSRGLEWL
GRTYYRSKWHNDYAVSVKSRITINPDTSKNQFSLQLNSVTPEDTAVYYCA
RGQMGALDVWGQGTTVTVSSQSVLTQPPSASGTPGQRVTISCSGSSSNIG
SYYVYWYQQFPGTAPKLLIYGNNQRPSGVPDRFSGSKSGTSASLAITGLQ
AEDEADYYCQSYDSSLSGVIFGGGTKLTVL

3D structure

PDB

5yax A potent human neutralizing antibody Fc-dependently reduces established HBV infections

Chain

Resolution

2.5 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	peptide	B	A38 R55 Y57 R59 G107 Q108 G113 S1036 Y1037 Y1038 Y1107	A35 R52 Y54 R56 G102 Q103 G105 S151 Y152 Y153 Y212

External links

PDB	RCSB:5yax, PDBe:5yax, PDBj:5yax
PDBsum	5yax
PubMed	28949917

[Back to BioLiP]