Structure of PDB 5y24 Chain B

Receptor sequence
>5y24B (length=350) Species: 66797 (Spbetavirus SPbeta) [Search protein sequence]
DGKTFNEFSSIVNIVKSQYPDREYELMKDYCLNLDVKTKAARSALEYADA
NMFFEIEDVLIDSMISCSNMKSKEYGKVYKIHRELSNSVITEFEAVKRLG
KLNIKTPEMNSFSRLLLLYHYLSTGNFSPMAQLIKQIDLSEISENMYIRN
TYQTRVHVLMSNIKLNENSLEECREYSKKALESTNILRFQVFSYLTIGNS
LLFSNYELAQENFLKGLSISVQNENYNMIFQQALCFLNNVWRKENKWINF
ESDSIMDLQEQAHCFINFNENSKAKEVLDKLDLLVHNDNELAMHYYLKGR
LEQNKACFYSSIEYFKKSNDKFLIRLPLLELQKMGENQKLLELLLLLEHH
3D structure
PDB5y24 Structural basis of the arbitrium peptide-AimR communication system in the phage lysis-lysogeny decision.
ChainB
Resolution1.922 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B Y159 L162 F167 V198 N202 N206 R228 F232 N239 Q272 A273 F276 M296 Q299 E300 D360 L363 Y119 L122 F127 V158 N162 N166 R188 F192 N199 Q232 A233 F236 M256 Q259 E260 D320 L323
Gene Ontology
Biological Process
GO:0098689 latency-replication decision

View graph for
Biological Process
External links
PDB RCSB:5y24, PDBe:5y24, PDBj:5y24
PDBsum5y24
PubMed30224798
UniProtO64094|AIMR_BPSPB AimR transcriptional regulator (Gene Name=aimR)

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