Structure of PDB 5y0q Chain B

Receptor sequence
>5y0qB (length=401) Species: 1423 (Bacillus subtilis) [Search protein sequence]
MKAVGLVVEYNPFHNGHLYHAQTAKLQTGCDTAVAVMSGHFLQRGEPAVV
SKWARTKMALQSGVDLVIELPYLYAVQKADIFARGSVSILNELECEALFF
GSENGDIKPFLETAQLIDEHKHILNDRIKEELKKGASYPAAAAIAFSSIL
HTESALDLSKPNNILGYQYVTSILTGGYPMKPYTTARINHIASATSIRKA
MIGQNLEACLRFLPAASARELAAYRKSFGLWHTPESYFSYLKYSLSTVTA
RELQQVYEVEEGLEHRIIRSIRKSSSYQEFMELLKTKRYTWTRLQRMNTH
ILTRTKKQDMQKLLDNDKAPYIRLLGMTKKGQAYLSEKKKALSVPLVSKL
SSFSHPALDLDVKASRIYSLPIEEPLRTEFDLQEYGHAPIRYDEDEQHFL
N
3D structure
PDB5y0q Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
ChainB
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 APC B E9 H14 G16 H17 R44 G101 A186 R187 S206 E9 H14 G16 H17 R44 G101 A186 R187 S193
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0016879 ligase activity, forming carbon-nitrogen bonds
Biological Process
GO:0006400 tRNA modification
GO:0008033 tRNA processing
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5y0q, PDBe:5y0q, PDBj:5y0q
PDBsum5y0q
PubMed30150682
UniProtO34513|TMCAL_BACSU tRNA(Met) cytidine acetate ligase (Gene Name=tmcAL)

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