Structure of PDB 5y0p Chain B

Receptor sequence
>5y0pB (length=401) Species: 1423 (Bacillus subtilis) [Search protein sequence]
MKAVGLVVEYNPFHNGHLYHAQTAKLQTGCDTAVAVMSGHFLQRGEPAVV
SKWARTKMALQSGVDLVIELPYLYAVQKADIFARGSVSILNELECEALFF
GSENGDIKPFLETAQLIDEHKHILNDRIKEELKKGASYPAAAAIAFSSIL
HTESALDLSKPNNILGYQYVTSILTGGYPMKPYTTARINHIASATSIRKA
MIGQNLEACLRFLPAASARELAAYRKSFGLWHTPESYFSYLKYSLSTVTA
RELQQVYEVEEGLEHRIIRSIRKSSSYQEFMELLKTKRYTWTRLQRMNTH
ILTRTKKQDMQKLLDNDKAPYIRLLGMTKKGQAYLSEKKKALSVPLVSKL
SSFSHPALDLDVKASRIYSLPIEEPLRTEFDLQEYGHAPIRYDEDEQHFL
N
3D structure
PDB5y0p Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis.
ChainB
Resolution2.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 6.3.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TAT B E9 H14 G16 H17 R44 G101 N162 R187 A207 E9 H14 G16 H17 R44 G101 N162 R187 A194
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0005524 ATP binding
GO:0016874 ligase activity
GO:0016879 ligase activity, forming carbon-nitrogen bonds
Biological Process
GO:0006400 tRNA modification
GO:0008033 tRNA processing
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5y0p, PDBe:5y0p, PDBj:5y0p
PDBsum5y0p
PubMed30150682
UniProtO34513|TMCAL_BACSU tRNA(Met) cytidine acetate ligase (Gene Name=tmcAL)

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