Structure of PDB 5xxf Chain B

Receptor sequence
>5xxfB (length=229) Species: 284812 (Schizosaccharomyces pombe 972h-) [Search protein sequence]
GSNEKIRSQSVLNTLETFFIKENHYDMQREESSIVNACLRYLGYSKSMCH
EKMPIFMDIAFIEYCFNLSQILWEYSLISNALERLENIELERQNCMREDG
LVKYTNELLLNKETLNNEALKLYSCAKAGICRWMAFHFLEQEPIDHINFT
KFLQDWGSHNEKEMEALQRLSKHKIRKRLIYVSQHKKKMPWSKFNSVLSR
YIQCTKLQLEVFCDYDFKQREIVKMLTSN
3D structure
PDB5xxf Structure of the fission yeast S. pombe telomeric Tpz1-Poz1-Rap1 complex.
ChainB
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B N129 T132 L133 E136 E181 M207 F212 R218 Q221 C222 N111 T114 L115 E118 E163 M189 F194 R200 Q203 C204
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005515 protein binding
Biological Process
GO:0000723 telomere maintenance
GO:0016233 telomere capping
GO:0032200 telomere organization
Cellular Component
GO:0000781 chromosome, telomeric region
GO:0005634 nucleus
GO:0005694 chromosome
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0070187 shelterin complex
GO:0140445 chromosome, telomeric repeat region

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5xxf, PDBe:5xxf, PDBj:5xxf
PDBsum5xxf
PubMed29160296
UniProtO13852|POZ1_SCHPO Protection of telomeres protein poz1 (Gene Name=poz1)

[Back to BioLiP]