Structure of PDB 5xt3 Chain B

Receptor sequence
>5xt3B (length=333) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
VRARVISHALKDILAEGDKVIIMGHKRPDLDAIGAAIGVSRFAMMNNLEA
YIVLNETDIDPTLRRVMNEIDKKPELRERFITSDDAWDMMTSKTTVVIVD
THKPELVLDENVLNKANRKVVIDHHRRGESFISNPLLIYMEPYASSTAEL
VTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSRTFDAASYLRA
HGADTILTQHFLKDDVDTYINRSELIRTVKVEDNGIAIAHGSDDKIYHPV
TVAQAADELLSLEGIEASYVVARREDNLIGISARSLGSVNVQLTMEALGG
GGHLTNAATQLKGVTVEEAIAQLQQAITEQLSR
3D structure
PDB5xt3 Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
ChainB
Resolution2.591 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN B D386 D455 H479 D534 D31 D100 H124 D179
BS02 C2E B P604 V605 S637 R639 G655 G656 N661 A662 A663 Q665 P249 V250 S282 R284 G300 G301 N306 A307 A308 Q310
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:5xt3, PDBe:5xt3, PDBj:5xt3
PDBsum5xt3
PubMed29203646
UniProtA0A0U1MUE2

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