Structure of PDB 5xsp Chain B

Receptor sequence
>5xspB (length=331) Species: 1280 (Staphylococcus aureus) [Search protein sequence]
VRARVISHALKDILAEGDKVIIMGHKRPDLDAIGAAIGVSRFAMMNNLEA
YIVLNETDIDPTLRRVMNEIDKKPELRERFITSDDAWDMMTSKTTVVIVD
THKPELVLDENVLNKANRKVVIDHHRRGESFISNPLLIYMEPYASSTAEL
VTELLEYQPTEQRLTRLESTVMYAGIIVDTRNFTLRTGSRTFDAASYLRA
HGADTILTQHFLKDDVDTYINRSELIRTVKVEDNGIAIAHGSDDKIYHPV
TVAQAADELLSLEGIEASYVVARREDNLIGISARSLGSVNVQLTMEALGG
GGHLTNAATQLKGVTVEEAIAQLQQAITEQL
3D structure
PDB5xsp Structural and biochemical characterization of the catalytic domains of GdpP reveals a unified hydrolysis mechanism for the DHH/DHHA1 phosphodiesterase
ChainB
Resolution2.146 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.1.4.-
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MN B D349 D418 H442 D497 D31 D100 H124 D179
BS02 MN B H343 D347 D418 H25 D29 D100
BS03 A B S600 R602 G619 G620 H621 N624 A625 A626 S282 R284 G301 G302 H303 N306 A307 A308
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding

View graph for
Molecular Function
External links
PDB RCSB:5xsp, PDBe:5xsp, PDBj:5xsp
PDBsum5xsp
PubMed29203646
UniProtA0A0U1MUE2

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