Structure of PDB 5xqo Chain B

Receptor sequence
>5xqoB (length=881) Species: 5076 (Penicillium chrysogenum) [Search protein sequence]
NCTSSSATVHWLGDKPTYHAGVTFGLPWPQGKYRPQETSFSLTLQSWATG
YWADGSLKWTAHAIAESNQIYDQYTVTASSLGCSIVVTDNSDALTVNTGE
VAVSFPKGGNVIIGDIKTKSGKVIGANGRLVLQSQDSVPDNFDNRANSPI
QYSNFDGNINEVFVNQTSARTLVTVRGNHTVTDGTDHDPWLPFVVRFYLY
ANSATIKVMHSIVFDGDENDFITGLGIRFDVPLKGEEYYDRHIRFAGVDG
GIFNEAVQGITGLRRDPGEEIRAAQFAGQKLADTETWEPRVSTRLKWIPT
WADYGLTQLTADGFGLKKRTKAGQSWVNIPSGTRAEGLAYLGGATQGGLA
VGLRDFWKRYPVGLDISNAASDTGELTLWLYSPAAEPLDLRPFHDGLGQD
GYEDQLDALEITFEDWEPGFDTPYGIARTSEVYLFAFDQTPTSDKLASLT
AYMNDPPVLVAEPKYIHETQALGEYWALPGSASPAAATLEDRLQFIFDFY
KGQIEQRRWYGFLDYGDFMHTYDPDRHTWRYDVGGYAWDNSELSPDLFFW
LYFLRTGSKDAYRFAEALTRHTGEVDVYHIGDWKGLGTRHGVQHWSDSAK
QARISQPQYRKYFFYLSGGDERVGELLEELLDTDKTYGELDPQRKVRTDG
WEPSPNSTVSFGLGTDWSGLAAGWLIEWERRGPRWEEAKTKLTNTIAGIA
NLTNGFVTGSGLYDPVTWTLGPPPSDPGNRGNVSISHLNAVFGLPEVVSE
AIAYLADDIPKGFKQAWLDYCYYYHASASEQKDRYGVSFSISLLQAHSRL
AAYAAYETKNKTLALRAWKDFYASDGLLPDAPWNITHVDGSDVLVPVDEA
AWLATNDIAQYGLAVIQNLAYVSDSLDDYQS
3D structure
PDB5xqo Crystal structure of exo-rhamnogalacturonan lyase from Penicillium chrysogenum as a member of polysaccharide lyase family 26
ChainB
Resolution3.2 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAD B R309 R310 R264 R265
BS02 RAM B D460 Q646 R648 D415 Q601 R603
BS03 ADA B F458 E587 R634 F413 E542 R589
BS04 CA B D562 N585 H616 D621 H639 D517 N540 H571 D576 H594
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5xqo, PDBe:5xqo, PDBj:5xqo
PDBsum5xqo
PubMed29574769
UniProtB6H7Q7

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