Structure of PDB 5xfi Chain B

Receptor sequence
>5xfiB (length=152) Species: 47519 (Calystegia sepium) [Search protein sequence]
AVPMDTISGPWGNNGGNFWSFRPVNKINQIVISYGGGGNNPIALTFSSTK
ADGSKDTITVGGGGPDSITGTEMVNIGTDEYLTGISGTFGIYLDNNVLRS
ITFTTNLKAHGPYGQKVGTPFSSANVVGNEIVGFLGRSGYYVDAIGTYNR
HK
3D structure
PDB5xfi Distinct roles for each N-glycan branch interacting with mannose-binding type Jacalin-related lectins Orysata and Calsepa.
ChainB
Resolution1.653 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MAN B G17 N96 G140 Y141 Y142 D144 G16 N95 G139 Y140 Y141 D143
Gene Ontology
Molecular Function
GO:0005536 D-glucose binding
GO:0005537 D-mannose binding
GO:0030246 carbohydrate binding
GO:0042802 identical protein binding
GO:0042803 protein homodimerization activity
GO:0050839 cell adhesion molecule binding
Biological Process
GO:0007157 heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0045840 positive regulation of mitotic nuclear division
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5xfi, PDBe:5xfi, PDBj:5xfi
PDBsum5xfi
PubMed28973127
UniProtP93114|LECC_CALSE Jacalin-related lectin Calsepa

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