Structure of PDB 5xdg Chain B

Receptor sequence
>5xdgB (length=400) Species: 107035 (Paenibacillus sp. A11-2) [Search protein sequence]
HRALDVATELAKTFRVTVRERERAGGTPKAERDAIRRSGLLTLLISKERG
GLGESWPTVYEAIAEIASADASLGHLFGYHFSNFAYVDLFASPEQKARWY
PQAVRERWFLGNASSENNAHVLDWRVTATPLPDGSYEINGTKAFCSGSAD
ADRLLVFAVTSRDPNGDGRIVAALIPSDRAGVQVNGDWDSLGMRQTDSGS
VTFSGVVVYPDELLGTPGQVTDAFASGSKPSLWTPITQLIFTHLYLGIAR
GALEEAAHYSRSHSRPFTLAGVEKATEDPYVLAIYGEFAAQLQVAEAGAR
EVALRVQELWERNHVTPEQRGQLMVQVASAKIVATRLVIELTSRLYEAMG
ARAAASRQFGFDRFWRDARTHTLHDPVAYKIREVGNWFLNHRFPTPSFYS
3D structure
PDB5xdg Crystal structures of TdsC, a dibenzothiophene monooxygenase from the thermophile Paenibacillus sp. A11-2, reveal potential for expanding its substrate selectivity.
ChainB
Resolution1.747 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.14.14.21: dibenzothiophene monooxygenase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FMN B R279 G364 A365 R366 R265 G350 A351 R352
BS02 FMN B Y93 N126 S129 F158 S160 H388 Y79 N112 S115 F144 S146 H374
BS03 83U B Y93 N97 N126 S128 S129 W247 H388 F412 Y413 Y79 N83 N112 S114 S115 W233 H374 F398 Y399
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0004497 monooxygenase activity
GO:0008470 3-methylbutanoyl-CoA dehydrogenase activity
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors
GO:0050660 flavin adenine dinucleotide binding
Biological Process
GO:0006552 L-leucine catabolic process
Cellular Component
GO:0005737 cytoplasm

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Cellular Component
External links
PDB RCSB:5xdg, PDBe:5xdg, PDBj:5xdg
PDBsum5xdg
PubMed28768765
UniProtQ9LBX2

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