Structure of PDB 5x6h Chain B

Receptor sequence
>5x6hB (length=115) Species: 10090 (Mus musculus) [Search protein sequence]
SPAVKRLLEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPGQPSKCVTI
PRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQ
KEVCINPYHYKRVES
3D structure
PDB5x6h Structural basis for the Smad5 MH1 domain to recognize different DNA sequences.
ChainB
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 dna B L72 Q77 S79 H80 L54 Q59 S61 H62
BS02 ZN B C110 C122 H127 C92 C104 H109
Gene Ontology
Biological Process
GO:0006355 regulation of DNA-templated transcription
Cellular Component
GO:0005667 transcription regulator complex

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5x6h, PDBe:5x6h, PDBj:5x6h
PDBsum5x6h
PubMed26304548
UniProtP97454|SMAD5_MOUSE Mothers against decapentaplegic homolog 5 (Gene Name=Smad5)

[Back to BioLiP]