Structure of PDB 5w83 Chain B

Receptor sequence
>5w83B (length=158) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence]
KETVYISSIALLKMLKHGRAGVPMEVMGLMLGEFVDDYTVNVVDVFAMPQ
SAVDDVFQAKMMDMLKQTGRDQMVVGWYHSHPGFGCWLSSVDVNTQKSFE
QLNSRAVAVVVDPIQSVKGKVVIDAFRLIDHYYSLNIDYHKTAKETKMLM
NLHKEQWQ
3D structure
PDB5w83 An AAA Motor-Driven Mechanical Switch in Rpn11 Controls Deubiquitination at the 26S Proteasome.
ChainB
Resolution1.554 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.19.12: ubiquitinyl hydrolase 1.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B E48 H109 H111 D122 E25 H79 H81 D92
Gene Ontology
Molecular Function
GO:0008233 peptidase activity
GO:0008237 metallopeptidase activity

View graph for
Molecular Function
External links
PDB RCSB:5w83, PDBe:5w83, PDBj:5w83
PDBsum5w83
PubMed28844860
UniProtP43588|RPN11_YEAST Ubiquitin carboxyl-terminal hydrolase RPN11 (Gene Name=RPN11)

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