Structure of PDB 5vh2 Chain B

Receptor sequence
>5vh2B (length=208) Species: 10090 (Mus musculus) [Search protein sequence]
NDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDKDTGDGGLVNYRILSG
AEGKFEIDESTGLIVTVDYLDYETKTSYLMNVSATDGAPPFNQGFCSVYV
TLLNELDEAVQFSNASYEAVIMENLALGTEIVRVQAYDIDNLNQITYRFD
AYTSAQAKALFKIDAITGVITVKGLVDREKGDFYTLTVVADDGGPKVDST
VKVYITVL
3D structure
PDB5vh2 Zooming in on Cadherin-23: Structural Diversity and Potential Mechanisms of Inherited Deafness.
ChainB
Resolution2.84 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B E1181 D1212 D1214 G1218 D1264 E3 D34 D36 G40 D86
BS02 CA B E1197 D1249 E1251 D1285 E1286 E19 D71 E73 D107 E108
BS03 CA B E1197 E1251 N1282 E1283 D1285 D1318 E19 E73 N104 E105 D107 D140
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
Biological Process
GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
Cellular Component
GO:0016020 membrane

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5vh2, PDBe:5vh2, PDBj:5vh2
PDBsum5vh2
PubMed30033219
UniProtQ99PF4|CAD23_MOUSE Cadherin-23 (Gene Name=Cdh23)

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