Structure of PDB 5v8t Chain B

Receptor sequence
>5v8tB (length=191) Species: 272560,559292 [Search protein sequence]
ETHINLKVSDGSSEIFFKIKKTTPLRRLMEAFAKRQGKEMDSLRFLYDGI
RIQADQTPEDLDMEDNDIIEAHREQIGGSTVVTTESGLKYEDLTEGSGAE
ARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQG
MKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV
3D structure
PDB5v8t Crystal structure of SMT fusion Peptidyl-prolyl cis-trans isomerase from Burkholderia pseudomallei complexed with SF354
ChainB
Resolution2.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 5.2.1.8: peptidylprolyl isomerase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 8ZV B Y33 D44 R49 F53 V62 I63 W66 Y89 G95 I98 F106 Y111 D122 R127 F131 V140 I141 W144 Y167 G173 I176 F184
BS02 MG B D51 P52 D129 P130
Gene Ontology
Molecular Function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity
GO:0046872 metal ion binding
Biological Process
GO:0006457 protein folding

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5v8t, PDBe:5v8t, PDBj:5v8t
PDBsum5v8t
PubMed
UniProtQ12306|SMT3_YEAST Ubiquitin-like protein SMT3 (Gene Name=SMT3);
Q63J95

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