Structure of PDB 5ur3 Chain B

Receptor sequence
>5ur3B (length=192) Species: 37296 (Human gammaherpesvirus 8) [Search protein sequence]
GLYVGGFVDVVSCPKLEQELYLDPDQVTDYLPVTEPLPITIEHLPETEVG
WTLGLFQVSHGIFCTGAITSPAFLELASRLADTSHVARAPVKNLPKEPLL
EILHTWLPGLSLSSIHPRELQTPSGPVFQHVSLCALGRRRGTVAVYGHDA
EWVVSRFSSVSKSERAHILQHVSSCRLEDLSTPNFVSPLETL
3D structure
PDB5ur3 Kaposi's Sarcoma Herpesvirus Protease in Complex with Allosteric Inhibitor
ChainB
Resolution1.8 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H46 S114 S116 H134 R142 R143
Catalytic site (residue number reindexed from 1) H43 S111 S113 H130 R138 R139
Enzyme Commision number 3.4.21.97: assemblin.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 8OY B I44 L140 I41 L136
BS02 8OY B L79 L83 A90 W109 S191 P192 L193 E194 T195 L76 L80 A87 W106 S187 P188 L189 E190 T191
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:5ur3, PDBe:5ur3, PDBj:5ur3
PDBsum5ur3
PubMed
UniProtO40922

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