Structure of PDB 5umf Chain B

Receptor sequence
>5umfB (length=223) Species: 521006 (Neisseria gonorrhoeae NCCP11945) [Search protein sequence]
AYRIAPSILSADFARLGEEVANVIAAGADLIHFDVMDNHYVPNLTFGPMV
CAALKPYASVPIDVHLMVEPVDDLIQSFAKAGASIITFHPEASRHIDRSL
SLIRDMGCQAGLVLNPATPVYVLENVLDRLDMVLLMSVNPGFGGQSFIPH
TLEKIRQVRAMLDRYEGKSGRRIAIEVDGGIKTDNIAAVARAGADTFVAG
SAIFGKPDYKAVIAAMRAELEKA
3D structure
PDB5umf Crystal Structure of a Ribulose-phosphate 3-epimerase from Neisseria gonorrhoeae with bound phosphate
ChainB
Resolution1.4 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) S9 H34 D36 M38 H67 M69 M138 D180
Catalytic site (residue number reindexed from 1) S7 H32 D34 M36 H65 M67 M136 D178
Enzyme Commision number 5.1.3.1: ribulose-phosphate 3-epimerase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B H34 D36 H67 D180 H32 D34 H65 D178
Gene Ontology
Molecular Function
GO:0004750 D-ribulose-phosphate 3-epimerase activity
GO:0016853 isomerase activity
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives
GO:0046872 metal ion binding
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006098 pentose-phosphate shunt
GO:0009052 pentose-phosphate shunt, non-oxidative branch
GO:0019323 pentose catabolic process
Cellular Component
GO:0005829 cytosol

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Molecular Function
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Cellular Component
External links
PDB RCSB:5umf, PDBe:5umf, PDBj:5umf
PDBsum5umf
PubMed
UniProtB4RLV9

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