Structure of PDB 5uij Chain B

Receptor sequence
>5uijB (length=397) Species: 28901 (Salmonella enterica) [Search protein sequence]
MKIIIAGKNDIAVNVTRWLQKKKKNIEIYAICNANDTGIDTFQRSFKKYC
KDNLIPIISLAEAYKIDDAIFLSLEFDKIVQPSKFNHNELFNIHFSYLPK
YKGMYTSAWPILNGEDTSGVTLHKIDHGIDTGAIIAQKEIIIQPFETAKD
LYEKYISEGTSLVIDNISTLLNSEYVEKEQNIKYSSYYSKKTIDYSNLEL
NFSKTAFEIINQLRAFTFREYQLPKLDGVNIFLGDVLSSRSIMKPGSILE
RNDKEIIVSTIDYDVVLYKDNFKEILEACKYSDSKYIAKLIRAKSILFEK
NIYGWSPVIVAAYHGNIELIKWLVSKGANINDRNYKGTTVAMYFKDYMLK
SGDYSGLKMLIDLGLDLTLTDYKDYTVFDYLEKSGNKNLLQYMMAFM
3D structure
PDB5uij Molecular architecture of an N-formyltransferase from Salmonella enterica O60.
ChainB
Resolution1.9 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) N92 H94 T121 D130
Catalytic site (residue number reindexed from 1) N92 H94 T121 D130
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TYD B K8 E75 Y105 S107 Y152 Y195 F218 Y221 Q222 K8 E75 Y105 S107 Y152 Y195 F218 Y221 Q222
BS02 TYD B W305 Y313 N334 T338 Y343 W305 Y313 N334 T338 Y343
Gene Ontology
Molecular Function
GO:0003824 catalytic activity
GO:0004479 methionyl-tRNA formyltransferase activity
GO:0016740 transferase activity
Biological Process
GO:0006413 translational initiation
GO:0009058 biosynthetic process
GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:5uij, PDBe:5uij, PDBj:5uij
PDBsum5uij
PubMed28263875
UniProtU3GK13

[Back to BioLiP]