Structure of PDB 5uej Chain B

Receptor sequence
>5uejB (length=376) Species: 487 (Neisseria meningitidis) [Search protein sequence]
TETQSLELAKELISRPSVTPDDRDCQKLLAERLHKIGFAAEELHFGDTKN
IWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD
MKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLK
ARDELIDYCIVGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHL
AINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGGTGATNVIPGE
LNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLTQAGK
LTDVARAAIAETCGIEAELSTTGGTSDGRFIKAIAQELIELGPSNATIHQ
INENVRLNDIPKLSAVYEGILARLLA
3D structure
PDB5uej 1.30 A crystal structure of DapE enzyme from Neisseria meningitidis MC58
ChainB
Resolution1.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.5.1.18: succinyl-diaminopimelate desuccinylase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ZN B D101 E136 H350 D100 E135 H349
BS02 ZN B H68 D101 E164 H67 D100 E163
Gene Ontology
Molecular Function
GO:0008270 zinc ion binding
GO:0008777 acetylornithine deacetylase activity
GO:0009014 succinyl-diaminopimelate desuccinylase activity
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
GO:0050897 cobalt ion binding
Biological Process
GO:0006526 L-arginine biosynthetic process
GO:0009085 lysine biosynthetic process
GO:0009089 lysine biosynthetic process via diaminopimelate
GO:0019877 diaminopimelate biosynthetic process

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Molecular Function
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Biological Process
External links
PDB RCSB:5uej, PDBe:5uej, PDBj:5uej
PDBsum5uej
PubMed
UniProtQ9JYL2|DAPE_NEIMB Succinyl-diaminopimelate desuccinylase (Gene Name=dapE)

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