Structure of PDB 5udr Chain B

Receptor sequence
>5udrB (length=243) Species: 1590 (Lactiplantibacillus plantarum) [Search protein sequence]
ATLATKKATLVAALKDLQRVTVAFSGGIDSTLVLKMALDVLGRDNVTAVV
ANSELFTDEEFDKAMSLAEELGANVQGTTLDYLSDDHIKNNTPDSWYYAK
KMFYSRLNDIAANNGSAAVLDGMEAGARSLLQEADFFKTDVRALAQELGL
TNWNKVASCSVSSRFPYGTTLTHDNIAQVMAAEKYLRSLGFPTVRVRFHN
DIARIELPEARIGDFLVFNDRVNRQLQSLGFRYVTLDLGGFRS
3D structure
PDB5udr Structural insights into the catalytic mechanism of a sacrificial sulfur insertase of the N-type ATP pyrophosphatase family, LarE.
ChainB
Resolution2.62 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 4.4.1.37: pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 NMN B W97 S180 R212 R214 R259 W96 S163 R195 R197 R242
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0016783 sulfurtransferase activity
GO:0016829 lyase activity

View graph for
Molecular Function
External links
PDB RCSB:5udr, PDBe:5udr, PDBj:5udr
PDBsum5udr
PubMed28784764
UniProtF9UST4|LARE_LACPL Pyridinium-3,5-bisthiocarboxylic acid mononucleotide synthase (Gene Name=larE)

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