Structure of PDB 5tg3 Chain B

Receptor sequence
>5tg3B (length=230) [Search protein sequence]
ADTIVAVELDSYPNTDIGDPNYPHIGIDIKSVRSKSTARWNMQTGKVGTV
HISYNSVSKRLSAVVSYSGSSSTTVSYDVDLNNVLPEWVRVGLSATTGLY
KQTNTILSWSFTSKLKNSLHFSFHKFSQNPKDLILQGDASTDSDGNLQLT
KVSSSGDPQGNSVGRALFYAPVHIWEKSAVVASFDATFTFLIKSPDREPA
DGITFFIANTDTTIPSGSGGRLLGLFPDAN
3D structure
PDB5tg3 Structural studies of a vasorelaxant lectin from Dioclea reflexa Hook seeds: Crystal structure, molecular docking and dynamics.
ChainB
Resolution1.765 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CA B D10 Y12 N14 D19 D10 Y12 N14 D19
BS02 MN B E8 D10 D19 H24 E8 D10 D19 H24
BS03 XMM B Y12 N14 G98 L99 Y100 A207 D208 R228 Y12 N14 G98 L99 Y100 A200 D201 R221
Gene Ontology
Molecular Function
GO:0005509 calcium ion binding
GO:0005537 D-mannose binding
GO:0030145 manganese ion binding
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5tg3, PDBe:5tg3, PDBj:5tg3
PDBsum5tg3
PubMed28130130
UniProtC0HK81|LECA_MACCS Lectin

[Back to BioLiP]