Structure of PDB 5ta9 Chain B

Receptor sequence
>5ta9B (length=369) Species: 820 (Bacteroides uniformis) [Search protein sequence]
YDQRKADSLGIPKGNKLSAAMKRAMEWPQRDNSWFFEYKMMPLKGDLAYE
EGIVRRDPSAMIKVGDKYYVWYSKSYGETQGFAGDVENEKVFPWDRCDIW
YATSKDGITWKEEGVAVKRGEKGAYDDRSVFTPEVMQWNGKYYLCYQTVK
SPYTVRVKENVAMAWADSPDGPWEKTDKPVLTPSDNGVWEGEEDNRFKVK
AKGDFDSHKVHDPCIIPYNGKFYLYYKGERMGEEITWGGREIKHGVAIAD
NPLGPYTKSEYNPISNSGHEICVWPYKGGIASLITTDGPEKNTLQWSPDG
INFEIMSVIPGAPHAIGLNRSADNDKEPTEILRWGLTHQYITYNYQCIMR
FETWTKQTHTAIGESTKRK
3D structure
PDB5ta9 Molecular basis of an agarose metabolic pathway acquired by a human intestinal symbiont.
ChainB
Resolution2.4 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 GAL B E262 R273 H302 E229 R240 H269
BS02 AAL B R89 W127 T165 Q180 H244 D245 K260 H302 E303 R56 W94 T132 Q147 H211 D212 K227 H269 E270
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016798 hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0005975 carbohydrate metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:5ta9, PDBe:5ta9, PDBj:5ta9
PDBsum5ta9
PubMed29535379
UniProtA0A2D0TCD6

[Back to BioLiP]