Structure of PDB 5t67 Chain B

Receptor sequence

>5t67B (length=402) Species: 46161 (Actinomadura kijaniata) [Search protein sequence]

PARCRVCGDTVDEFLDLGRQPLSDRFLTPDGEFFYRLAVGRCHACGMVQL
TEEVPRHLMFHEEYPYHSSGSSVMREHFAKVAQRLLATELTGADPFVVEI
GCNDGIMLRAVHEAGVRHLGFEPSAGVAEVARSRGVRVRTEFFEKATATA
VRESEGPADVIYAANTMCHIPYLESVFQGADALLGPDGVVVFEDPYLGDI
VAKTSFDQIYDEHFYLFSAGSVAAMAERFGFELVDVERLPVHGGEVRYTL
ARRGARTPTEAVGRLLAEEREQGLDDLATLRTFAANVHTVRDELVALLTR
LRAEGHRVVGYGATAKSATVTNFCGIGPDLVSFVCDTTPGKQHRLTPGKH
LPVRPAEAFADPYPDYALLFAWNHADEIMAKEQEFRQAGGRWILYVPEVR
VL

3D structure

PDB

5t67 Structural studies on KijD1, a sugar C-3'-methyltransferase.

Chain

Resolution

1.6 Å

3D
structure

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Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	ZN	B	C13 C16 C54 C57	C4 C7 C42 C45
BS02	SAH	B	F72 S80 F90 I112 G113 N115 F133 E134 P135 F154 F155 A176 N177 T178 I182 Y184	F60 S68 F78 I100 G101 N103 F121 E122 P123 F142 F143 A164 N165 T166 I170 Y172
BS03	JHZ	B	Y78 Y222 E224 H254 T326 A327 K328 D348 T349 K353 N385 H386 E389 I390 K393	Y66 Y210 E212 H242 T314 A315 K316 D336 T337 K341 N373 H374 E377 I378 K381

Gene Ontology

	Molecular Function
GO:0016740	transferase activity
GO:0046872	metal ion binding

View graph for
Molecular Function

External links

PDB	RCSB:5t67, PDBe:5t67, PDBj:5t67
PDBsum	5t67
PubMed	27595766
UniProt	B3TMQ9

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