Structure of PDB 5t4y Chain B

Receptor sequence
>5t4yB (length=553) Species: 226186 (Bacteroides thetaiotaomicron VPI-5482) [Search protein sequence]
CDDFLDRQVPQGIVTGDQIASPEYVDNLVISAYAIWATGDDINSSFSLWN
YDVRSDDCYKGGSGTEDGGVFNALEISKGINTTDWNINDIWKRLYQCITR
ANTALQSLDQMDEKTYPLKNQRIAEMRFLRGHAHFMLKQLFKKIVIVNDE
NMEPDAYNELSNTTYTNDEQWQKIADDFQFAYDNLPEVQIEKGRPAQAAA
AAYLAKTYLYKAYRQDGADNALTGINEEDLKQVVKYTDPLIMAKGGYGLE
TDYSMNFLPQYENGAESVWAIQYSINDGTYNGNLNWGMGLTTPQILGCCD
FHKPSQNLVNAFKTDSQGKPLFSTYDNENYEVATDNVDPRLFHTVGMPGF
PYKYNEGYIIQKNDDWSRSKGLYGYYVSLKENVDPDCDCLKKGSYWASSL
NHIVIRYADVLLMRAEALIQLNDGRITDAISLINEVRSRAAGSTMLIFNY
KEDYGVNFKVTPYDLKAYAQDEAMKMLKWERRVEFGMESSRFFDLVRWGE
AKDVINAYYVTEASRCSIYKNAGFTENKNEYLPVPFEQISASNGNYTQNF
GWH
3D structure
PDB5t4y Structural basis for nutrient acquisition by dominant members of the human gut microbiota.
ChainB
Resolution3.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 MG B E262 Y273 N401 E262 Y273 N401
BS02 MG B V53 R54 S55 Y519 V53 R54 S55 Y519
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
Cellular Component
GO:0016020 membrane

View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB RCSB:5t4y, PDBe:5t4y, PDBj:5t4y
PDBsum5t4y
PubMed28077872
UniProtQ8A6W4

[Back to BioLiP]