Structure of PDB 5sy1 Chain B

Receptor sequence
>5sy1B (length=582) Species: 7955 (Danio rerio) [Search protein sequence]
EVIPPCDPTADEGLFHICIAAISLVVMLVLAILARRQKLSDNQRGLTGLL
SPVNFLDHTQHKGLAVAVYGVLFCKLVGMVLSHHPLPFTKEVANKEFWMI
LALLYYPTLYYPLLACGTLHNKVGYVLGSLLSWTHFGILVWQKVDCPKTP
QIYKYYALFGSLPQIACLAFLSFQYPLLLFKGLQNTETANASEDLSSSYY
RDYVKKILKKKKPTKISSSTSKPKLFDRLRDAVKSYIYTPEDVFRFPLKL
AISVVVAFIALYQMALLLISGVLPTLHIVRRGVDENIAFLLAGFNIILSN
DRQEVVRIVVYYLWCVEICYVSAVTLSCLVNLLMLMRSMVLHRSNLKGLY
RGDSLNVFNCHRSIRPSRPALVCWMGFTSYQAAFLCLGMAIQTLVFFICI
LFAVFLIIIPILWGTNLMLFHIIGNLWPFWLTLVLAALIQHVASRFLFIR
KDGGTRDLNNRGSLFLLSYILFLVNVMIGVVLGIWRVVITALFNIVHLGR
LDISLLNRNVEAFDPGYRCYSHYLKIEVSQSHPVMKAFCGLLLQSSGQDN
KVSNAKRARAHWQLLYTLVNNPSLVGSRKHFQ
3D structure
PDB5sy1 Structure of the STRA6 receptor for retinol uptake.
ChainB
Resolution3.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 CLR B V512 T515 V487 T490
BS02 CLR B L419 N519 L394 N494
Gene Ontology
Molecular Function
GO:0005516 calmodulin binding
GO:0016918 retinal binding
GO:0019841 retinol binding
GO:0034632 retinol transmembrane transporter activity
GO:0038023 signaling receptor activity
GO:0042802 identical protein binding
GO:0060090 molecular adaptor activity
Biological Process
GO:0034633 retinol transport
GO:0043009 chordate embryonic development
GO:0071939 vitamin A import into cell
Cellular Component
GO:0005886 plasma membrane

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Molecular Function
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Cellular Component
External links
PDB RCSB:5sy1, PDBe:5sy1, PDBj:5sy1
PDBsum5sy1
PubMed27563101
UniProtF1RAX4|STRA6_DANRE Receptor for retinol uptake stra6 (Gene Name=stra6)

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