Structure of PDB 5qj2 Chain B

Receptor sequence
>5qj2B (length=465) Species: 9606 (Homo sapiens) [Search protein sequence]
VNCETSCVQQPPCFPLKIPPNDPRIKNQADCIPFFRSCPACPGSNITIRN
QINALTSFVDASMVYGSEEPLARNLRNMSNQLGLLAVNQRFQDNGRALLP
FDNLHDDPCLLTNRSARIPCFLAGDTRSSEMPELTSMHTLLLREHNRLAT
ELKSLNPRWDGERLYQEARKIVGAMVQIITYRDYLPLVLGPTAMRKYLPT
YRSYNDSVDPRIANVFTNAFRYGHTLIQPFMFRLDNRYQPMEPNPRVPLS
RVFFASWRVVLEGGIDPILRGLMATPAKLNRQNQIAVDEIRERLFEQVMR
IGLDLPALNMQRSRDHGLPGYNAWRRFCGLPQPETVGQLGTVLRNLKLAR
KLMEQYGTPNNIDIWMGGVSEPLKRKGRVGPLLACIIGTQFRKLRDGDRF
WWENEGVFSMQQRQALAQISLPRIICDNTGITTVSKNNIFMSNSYPRDFV
NCSTLPALNLASWRE
3D structure
PDB5qj2 Potent Triazolopyridine Myeloperoxidase Inhibitors.
ChainB
Resolution2.82 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 1.11.2.2: myeloperoxidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 FUC B V320 R504 V208 R392
BS02 HEM B E242 M243 T329 F332 R333 G335 H336 I339 L406 L417 R424 E130 M131 T217 F220 R221 G223 H224 I227 L294 L305 R312
BS03 BMA B F439 C440 F327 C328
BS04 MAN B F439 K505 F327 K393
BS05 JXS B T238 R239 F366 F407 T126 R127 F254 F295 PDBbind-CN: -logKd/Ki=7.68,IC50=21nM
BS06 CA B T168 F170 D172 S174 T56 F58 D60 S62
Gene Ontology
Molecular Function
GO:0004601 peroxidase activity
GO:0020037 heme binding
Biological Process
GO:0006979 response to oxidative stress

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Molecular Function
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Biological Process
External links
PDB RCSB:5qj2, PDBe:5qj2, PDBj:5qj2
PDBsum5qj2
PubMed30613322
UniProtP05164|PERM_HUMAN Myeloperoxidase (Gene Name=MPO)

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