Structure of PDB 5onz Chain B

Receptor sequence
>5onzB (length=445) Species: 1122247 (Mycolicibacterium hassiacum DSM 44199) [Search protein sequence]
PHDPSFTPTQLAARAAYLLRGNDLGTMTTAAPLLYPHMWSWDAAFVAIGL
APLSVERAVVELDTLLSAQWRNGMIPHIVFANGVDGYFPGPARWATATLA
DNAPRNRLTSGITQPPVHAIAVQRILEHARTRGRSTRAVAEAFLDRRWGD
LMRWHRWLAECRDRNERGRITLYHGWESGMANSPRWDSAYANVVPGKLPE
YQRADNVIITDPSQRPSDGEYDRYLWLLEEMKAVRYDDERLPSVMSFQVE
DVFFSAIFSVACQVLAEIGEDYKRPHADVKDLYLWAERFRAGVVETTDQR
TGAARDFDVLAEKWLVTETAAQFAPLLCGGLPHDRERALLKLLEGPRFCG
HPDLKYGLIPSTSPVSRDFRPREYWRGPVWPVLTWLFSWCFARRGWAERA
RLLRQEGLRQASDGSFAEYYEPFTGEPLGSMQQSWTAAAVLDWLG
3D structure
PDB5onz The structural characterization of a glucosylglycerate hydrolase provides insights into the molecular mechanism of mycobacterial recovery from nitrogen starvation.
ChainB
Resolution1.93 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.208: glucosylglycerate hydrolase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 9YW B Y36 W40 W42 D43 Y88 G180 Y375 W436 Y35 W39 W41 D42 Y87 G179 Y374 W435
BS02 SER B W40 H78 Y88 Y375 W39 H77 Y87 Y374
Gene Ontology
Molecular Function
GO:0004573 Glc3Man9GlcNAc2 oligosaccharide glucosidase activity
GO:0016787 hydrolase activity
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0102547 glucosylglycerate hydrolase activity
Biological Process
GO:0005975 carbohydrate metabolic process
GO:0006487 protein N-linked glycosylation
GO:0009311 oligosaccharide metabolic process

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Molecular Function

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Biological Process
External links
PDB RCSB:5onz, PDBe:5onz, PDBj:5onz
PDBsum5onz
PubMed31316802
UniProtK5BDL0|GGH_MYCHD Glucosylglycerate hydrolase (Gene Name=ggh)

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