Structure of PDB 5ok6 Chain B

Receptor sequence
>5ok6B (length=217) Species: 9606 (Homo sapiens) [Search protein sequence]
ELPGLDSQWRQIENGESGRERPLRAGESWFLVEKHWYKQWEAYVQGGDQD
SSTFPGCINNATLFQDEINWRLKEGLVEGEDYVLLPAAAWHYLVSWYGLE
HGQPPIERKVIELPNIQKVEVYPVELLLVRHNDLGKSHTVQFSHTDSIGL
VLRTARERFLVEPQEDTRLWAKNSEGSLDRLYDTHITVLDAALETGQLII
METRKKDGTWPSAQLEH
3D structure
PDB5ok6 Discovery of peptide ligands targeting a specific ubiquitin-like domain-binding site in the deubiquitinase USP11.
ChainB
Resolution1.3 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.4.19.12: ubiquitinyl hydrolase 1.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B H161 N162 L164 W200 N203 S207 L208 D209 L245 E246 H247 H131 N132 L134 W170 N173 S177 L178 D179 L215 E216 H217
Gene Ontology
Molecular Function
GO:0004843 cysteine-type deubiquitinase activity

View graph for
Molecular Function
External links
PDB RCSB:5ok6, PDBe:5ok6, PDBj:5ok6
PDBsum5ok6
PubMed30373771
UniProtP51784|UBP11_HUMAN Ubiquitin carboxyl-terminal hydrolase 11 (Gene Name=USP11)

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