Structure of PDB 5oeb Chain B

Receptor sequence
>5oebB (length=405) Species: 749413 (Deep-sea thermophilic phage D6E) [Search protein sequence]
PFSKKQLKVLTWWRKASPVSDKDGIICDGSIRAGKTIVMSFSYVMWAMDT
FNEQNFGMAGKTIGALRRNVITPLKRMLKSRGYRVKDHRADNYLTITFKG
KTNYFYLFGGKDESSQDLIQGITLAGMFFDEVALMPESFVNQATARCSVD
GAKLWFNCNPAGPYHWFKVEYLDKLDEKNLLHLHFTMDDNLSLSKQVKER
YQRMYKGVFYQRYILGLWVLAEGIIYDMFDQDEHVVPTVPRPYEKYYVSC
DYGTQNPTTFGLWGLYNGVWYKVKEYHYDGRKENKQKTDQEYYEDLMKFI
EDIEKHKFKGVIVDPSAASFIALLRQKGIKVIKAKNDVLDGIRNVATALN
KKMILYNDCCKETFREYSSYVWDEKAAERGEDKPVKQNDHQLDADRYFVN
TILFG
3D structure
PDB5oeb Structure of the large terminase from a hyperthermophilic virus reveals a unique mechanism for oligomerization and ATP hydrolysis.
ChainB
Resolution3.1 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 ADP B F14 Q18 I43 R44 A45 G46 K47 T48 N202 F2 Q6 I31 R32 A33 G34 K35 T36 N190
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5oeb, PDBe:5oeb, PDBj:5oeb
PDBsum5oeb
PubMed29069443
UniProtE5DV50

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