Structure of PDB 5oea Chain B

Receptor sequence
>5oeaB (length=409) Species: 749413 (Deep-sea thermophilic phage D6E) [Search protein sequence]
FYFQPFSKKQLKVLTWWRKASPVSDKDGIICDGSIRAGKTIVMSFSYVMW
AMDTFNEQNFGMAGKTIGALRRNVITPLKRMLKSRGYRVKDHRADNYLTI
TFKGKTNYFYLFGGKDESSQDLIQGITLAGMFFDEVALMPESFVNQATAR
CSVDGAKLWFNCNPAGPYHWFKVEYLDKLDEKNLLHLHFTMDDNLSLSKQ
VKERYQRMYKGVFYQRYILGLWVLAEGIIYDMFDQDEHVVPTVPRPYEKY
YVSCDYGTQNPTTFGLWGLYNGVWYKVKEYHYDGRKENKQKTDQEYYEDL
MKFIEDIEKHKFKGVIVDPSAASFIALLRQKGIKVIKAKNDVLDGIRNVA
TALNKKMILYNDCCKETFREYSSYVWDEKAAERGEDKPVKQNDHQLDADR
YFVNTILFG
3D structure
PDB5oea Structure of the large terminase from a hyperthermophilic virus reveals a unique mechanism for oligomerization and ATP hydrolysis.
ChainB
Resolution3.0 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AGS B Q12 Q18 I43 R44 A45 G46 K47 T48 I49 N171 N202 S204 Q4 Q10 I35 R36 A37 G38 K39 T40 I41 N163 N194 S196
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:5oea, PDBe:5oea, PDBj:5oea
PDBsum5oea
PubMed29069443
UniProtE5DV50

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