Structure of PDB 5o80 Chain B

Receptor sequence
>5o80B (length=496) Species: 209285 (Thermochaetoides thermophila) [Search protein sequence]
KKARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNSKSDEDGFR
KDVIELVKELNVPIIAYPGGNFVSNYFWEDGVGPVEDRPRRLDLAWKSIE
PNQVGINEFAKWCKKVNAEIMMAVNLGTRGISDACNLLEYCNHPGGSKYS
DMRIKHGVKEPHNIKVWCLGNEMDGPWQVGHKTMDEYGRIAEETARAMKM
IDPSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQYYGNKEND
TADFLAKSDDLDDFIRSVIATCDYIKAKKRSKKDIYLSFDEWNVWYHSNN
EDANIMQNEPWRIAPPLLEDIYTFEDALLVGLMLITLMKHADRIKIACLA
QLINVIAPIVTERNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDT
SKHEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVRGMRLLEHI
VLEHQDLKIRNSVNGEEVYPKNSDKFDDGILTSMLRRASWNVIRIG
3D structure
PDB5o80 To be announced
ChainB
Resolution2.915 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 3.2.1.55: non-reducing end alpha-L-arabinofuranosidase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 AHR B F25 E27 N72 E173 Y244 E292 Q352 F24 E26 N71 E172 Y243 E291 Q351
Gene Ontology
Molecular Function
GO:0016798 hydrolase activity, acting on glycosyl bonds
GO:0046556 alpha-L-arabinofuranosidase activity
Biological Process
GO:0000272 polysaccharide catabolic process
GO:0031222 arabinan catabolic process
GO:0046373 L-arabinose metabolic process
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5o80, PDBe:5o80, PDBj:5o80
PDBsum5o80
PubMed
UniProtA3DIH0|IABF_ACET2 Intracellular exo-alpha-(1->5)-L-arabinofuranosidase (Gene Name=Cthe_2548)

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