Structure of PDB 5nsl Chain B

Receptor sequence

>5nslB (length=624) Species: 264483 (Phaffia rhodozyma) [Search protein sequence]

CSLDQTVAPGNLTLCGNATLFTTFRPKARFIAPEGWMNAPMGLYQRADGS
IHAGYQSHPKHIQWGNISQGAAYSSDFTSWTDFNGSEGYKTIWPSQIYDI
RGVFDGSIIKEGIDGYPTILYTSTSFGPLGATLNEAEGTETQSLAYTTDD
GASWIKLGYGAGQNPVIYEWPETNLTGFRDPYVFQSPRLEALLANTTSIT
NATGDHFATISGGVHGDGARLFLYRQHTTGEFIKWTYLGPLVTTGYKESY
GEWSGNYGINFETAGVTRLNPAGAAWDNGSDTTAVDFVTFGTEQGRADHQ
NHWPLWAAVDYEVRDNGSIEAVIAYSGVQDWGRSYAYASFPVEGYRQVSV
GWIYEDDDNVILAKQFGYQGAFTLFRDLFVKVVENVSPSTPGLFEQASWS
TKNSTDGMSVTVTTLGQRVVPETLAAYKGNSTVSTLAPVMLNESAAAYTP
FSSQPTDRFYALTGSFEFGLNTTAKAGFRVLASEEEYTDIWFDPASENLT
VVRTASSLIKSFGNDTELAKVKLYEIVGAESKTLNLTVFVDGSVIEIYAN
DEVALSTRAYPWLANSTGAGLLADGTTAGDVVGVSGLELWDGLVDAWPAR
PANTSQGLVWDGPTAAMYGLFAGY

3D structure

PDB

5nsl Fructosylation of Hydroxytyrosol by the Beta-Fructofuranosidase from Xanthophyllomyces dendrorhous: Insights into the Molecular Basis of the Enzyme Specificity

Chain

Resolution

1.7 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Enzymatic activity

Enzyme Commision number

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	FRU	B	N79 Q97 W105 F145 D146 R220 D221 E303 Y376	N38 Q56 W64 F104 D105 R179 D180 E262 Y335
BS02	975	B	W105 L170 R220	W64 L129 R179
BS03	975	B	W77 Q341 W393	W36 Q300 W352
BS04	975	B	Q341 N342 D399	Q300 N301 D358
BS05	975	B	I150 Y223 V224 F225 Q226 W317 P382	I109 Y182 V183 F184 Q185 W276 P341
BS06	975	B	P312 F420 V421 K422 V423	P271 F379 V380 K381 V382
BS07	975	B	T504 S506 N576 D592	T463 S465 N535 D551
BS08	975	B	K469 E629 W631	K428 E588 W590
BS09	975	B	P642 T645 Q647	P601 T604 Q606
BS10	975	B	E293 R337 D339 H340 W344 L559	E252 R296 D298 H299 W303 L518
BS11	975	B	E75 E128	E34 E87
BS12	975	B	Q86 R87 A88 K151	Q45 R46 A47 K110
BS13	975	B	P479 M481 E508 G624	P438 M440 E467 G583
BS14	975	B	M481 E508 G510 V622	M440 E467 G469 V581
BS15	975	B	A235 N236	A194 N195
BS16	975	B	D155 G156	D114 G115

Gene Ontology

	Molecular Function
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

	Biological Process
GO:0005975	carbohydrate metabolic process

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:5nsl, PDBe:5nsl, PDBj:5nsl
PDBsum	5nsl
PubMed
UniProt	J7HDY4

[Back to BioLiP]