Structure of PDB 5ney Chain B

Receptor sequence
>5neyB (length=114) Species: 287 (Pseudomonas aeruginosa) [Search protein sequence]
ATQGVFTLPANTRFGVTAFANSSGTQTVNVLVNNETAATFSGQSTNNAVI
GTQVLNSGSSGKVQVQVSVNGRPSDLVSAQVILTNELNFALVGSEDGTDN
DYNDAVVVINWPLG
3D structure
PDB5ney Design, crystal structure and atomic force microscopy study of thioether ligated d,l-cyclic antimicrobial peptides against multidrug resistant Pseudomonas aeruginosa.
ChainB
Resolution1.55 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B V69 R72 D96 G97 V69 R72 D96 G97
BS02 CA B E95 D99 D101 D104 E95 D99 D101 D104
BS03 CA B N21 D101 N103 D104 N21 D101 N103 D104
BS04 ZDC B S22 S23 D96 D99 D101 D104 S22 S23 D96 D99 D101 D104
Gene Ontology
Molecular Function
GO:0030246 carbohydrate binding
GO:0046872 metal ion binding
Biological Process
GO:0044010 single-species biofilm formation

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Molecular Function
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Biological Process
External links
PDB RCSB:5ney, PDBe:5ney, PDBj:5ney
PDBsum5ney
PubMed29163899
UniProtQ9HYN5

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