Structure of PDB 5n1q Chain B

Receptor sequence
>5n1qB (length=442) Species: 523845 (Methanothermococcus thermolithotrophicus DSM 2095) [Search protein sequence]
VKYEDKISLYDAKGNLVEDGVPLEAISPLYNPTIKAMVKNIKRTVAVNLA
GIENSLKTGAIGGKGCKVPGRTLDLPIVENAEAIMDEVEKILRITPDDDT
QLRAINDGKQLVVQVPSKRLEVAAEYSVSMLNTAMALKEAIIKTFDVDLF
DGSTIHAAIVGRYPQVMDYMGGNIASLLGAPSNMEGLGYALRNIMVNHYV
ATTKKNLMNAVAFASIMEQTAMFEMGDAIGSFERMHLLGLAYQGLNSDNL
VIDLVKANSKGTVGTVVASVVERALEDKVIVEDKSLESGFTMYKPADVAK
WNAYAAAGLVAAVIVNCGAARAAQNVASTILYYNDILEYETGLPGTDFGR
AEGTAVGFSFFSHSIYGGGGPGIFTGNHVVTRHSKGFAIPPVCAAMCADA
GTQMFSPEKTSALVGAVYSAIDEFREPLKYVIEGALEVKDKI
3D structure
PDB5n1q Phylogenetic and Structural Comparisons of the Three Types of Methyl Coenzyme M Reductase from Methanococcales and Methanobacteriales.
ChainB
Resolution1.9 Å
3D
structure
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Enzymatic activity
Enzyme Commision number 2.8.4.1: coenzyme-B sulfoethylthiotransferase.
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 TP7 B F362 Y367 G369 V380 F361 Y366 G368 V379
BS02 COM B F361 Y367 F360 Y366
BS03 F43 B I366 Y367 I365 Y366
Gene Ontology
Molecular Function
GO:0016740 transferase activity
GO:0050524 coenzyme-B sulfoethylthiotransferase activity
Biological Process
GO:0015948 methanogenesis
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5n1q, PDBe:5n1q, PDBj:5n1q
PDBsum5n1q
PubMed28559298
UniProtA0A247D6X4

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