Structure of PDB 5mth Chain B

Receptor sequence

>5mthB (length=218) Species: 10090 (Mus musculus) [Search protein sequence]

DIVMSQSPSSLAVSAGEKVTMSCKSSQSLLNSRTRKNYLAWYQQKPGQSP
KLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSFYL
RTFGGGTKLDIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDIN
VRWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCE
ATHKTSTSPIVKSFNRNE

3D structure

PDB

5mth Structure of DC8E8 Fab at pH 6.5 crystallized in spacegroup P21

Chain

Resolution

1.73 Å

3D
structure

[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]

Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)	Binding affinity
BS01	GLC	B	P46 Q171 D172 S173	P46 Q171 D172 S173
BS02	GLC	B	D170 D172	D170 D172

External links

PDB	RCSB:5mth, PDBe:5mth, PDBj:5mth
PDBsum	5mth
PubMed

[Back to BioLiP]