Structure of PDB 5meg Chain B

Receptor sequence
>5megB (length=563) Species: 41431 (Rippkaea orientalis PCC 8801) [Search protein sequence]
MVQPSLPQDDTPDQQEQRNRAIAQQREAYQYSETAGILLIKTLPQSEMFS
LKYLIERDKGLVSLIANTLASNIENIFDPFDKLEDFEEMFPLLPKPLVMN
TFRNDRVFARQRIAGPNPMVIERVVDKLPDNFPVTDAMFQKIMFTKKTLA
EAIAQGKLFITNYKGLAELSPGRYEYQKNGTLVQKTKTIAAPLVLYAWKP
RGSLAPIAIQINQQPDPITNPIYTPRDGKHWFIAKIFAQMADGNCHEAIS
HLARTHLILEPFVLATANELAPNHPLSVLLKPHFQFTLAINELAREQLIS
AGGYADDLLAGTLEASIAVIKAAIKEYMDNFTEFALPRELARRGVGIGDV
DQRGENFLPDYPYRDDAMLLWNAIEVYVRDYLSLYYQSPVQIRQDTELQN
WVRRLVSPEGGRVTGLVSNGELNTIEALVAIATQVIFVSGPQHAAVNYPQ
YDYMAFIPNMPLATYATPPNKESNISEATILNILPPQKLAARQLELMRTL
CVFYPNRLGYPDTEFVDVRAQQVLHQFQERLQEIEQRIVLCNEKRLEPYT
YLLPSNVPNSTSI
3D structure
PDB5meg Lipoxygenase 2 from Cyanothece sp. controls dioxygen insertion by steric shielding and substrate fixation.
ChainB
Resolution2.0 Å
3D
structure
Catalytic site residues are labeled in the structure
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Enzymatic activity
Catalytic site (original residue number in PDB) H257 H262 H449 N453 I569
Catalytic site (residue number reindexed from 1) H251 H256 H443 N447 I563
Enzyme Commision number 1.13.11.33: arachidonate 15-lipoxygenase.
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MN B H257 H262 H449 N453 I569 H251 H256 H443 N447 I563
Gene Ontology
Molecular Function
GO:0016491 oxidoreductase activity
GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872 metal ion binding
GO:0050473 arachidonate 15-lipoxygenase activity
Biological Process
GO:0034440 lipid oxidation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5meg, PDBe:5meg, PDBj:5meg
PDBsum5meg
PubMed28522865
UniProtB7JX99

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