Structure of PDB 5ma1 Chain B

Receptor sequence

>5ma1B (length=416) Species: 1150621 (Sulfurospirillum multivorans DSM 12446) [Search protein sequence]

IRQQFAMTAGSPIIVNDKLERYAEVRTAFTHPTSFFKPNYKGEVKPWFLS
AYDEKVRQIENGENGPKMKAKNVGEARAGRALEAAGWTLDINYGNIYPNR
FFMLWSGETMTNTQLWAPVGLDRRPPDTTDPVELTNYVKFAARMAGADLV
GVARLNRNWVYSEAVTIPADVPYEQSLHKEIEKPIVFKDVPLPIETDDEL
IIPNTCENVIVAGIAMNREMMQTAPNSMACATTAFCYSRMCMFDMWLCQF
IRYMGYYAIPSCNGVGQSVAFAVEAGLGQASRMGACITPEFGPNVRLTKV
FTNMPLVPDKPIDFGVTEFCETCKKCARECPSKAITEGPRTFEGRSIHNQ
SGKLQWQNDYNKCLGYWPESGGYCGVCVAVCPFTKNITEVWDGKINTYGL
DADHFRDTVSFRKDRV

3D structure

PDB

5ma1 Cobamide-mediated enzymatic reductive dehalogenation via long-range electron transfer.

Chain

Resolution

2.498 Å

3D
structure

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Interaction with ligand

Site #	Ligand	Ligand chain	Binding residues on receptor (original residue number in PDB)	Binding residues on receptor (residue number reindexed from 1)
BS01	SF4	B	S290 R291 M292 I296 F328 C329 C332 C335 C390 P391 F392	S281 R282 M283 I287 F319 C320 C323 C326 C381 P382 F383
BS02	SF4	B	C339 P340 I344 C372 C383 G384 C386	C330 P331 I335 C363 C374 G375 C377
BS03	BVQ	B	Y31 T36 A37 F38 Y170 Y246 M249 N272 G275 Q276 S277 V278 A289 M292 G293 A294 C295 V304 R305 L306 H357 N358 Q359 K362 Q364 Y369 C372 W376 Y382	Y22 T27 A28 F29 Y161 Y237 M240 N263 G266 Q267 S268 V269 A280 M283 G284 A285 C286 V295 R296 L297 H348 N349 Q350 K353 Q355 Y360 C363 W367 Y373
BS04	T6C	B	F38 W96 Y102 Y246 R305 W376 Y382	F29 W87 Y93 Y237 R296 W367 Y373

External links

PDB	RCSB:5ma1, PDBe:5ma1, PDBj:5ma1
PDBsum	5ma1
PubMed	28671181

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