Structure of PDB 5lsf Chain B

Receptor sequence
>5lsfB (length=239) Species: 89463 (Sacbrood virus) [Search protein sequence]
EVPSKESIQGDATQQSSKEENTIITRDQQQTVSENIPSTVGDLVIASSEP
TQQFRSLTNRWMPINSIRVTVNGKRNDLLAQYYIPEDFLSTHAKCAPNTI
PFETYVYGKYELEMKFVANGNKFQCGKVIISVKFDSYQADNINTGFQAAL
SRPHIMLDLSTNNEGVLKIPFRYHRAFVRNQTHKTATAGVRPGKFASIYV
QVLSPLQTGEGGANDMFIRPFYRYTRAEFAGMSYKVPLT
3D structure
PDB5lsf Virion structure and genome delivery mechanism of sacbrood honeybee virus.
ChainB
Resolution2.1 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 peptide B L80 Q83 Y85 D89 Y139 Q140 D142 N143 T146 R193 P194 K196 Y201 L78 Q81 Y83 D87 Y137 Q138 D140 N141 T144 R191 P192 K194 Y199
Gene Ontology
Molecular Function
GO:0005198 structural molecule activity

View graph for
Molecular Function
External links
PDB RCSB:5lsf, PDBe:5lsf, PDBj:5lsf
PDBsum5lsf
PubMed29987012
UniProtA0A2S0CUG6

[Back to BioLiP]