Structure of PDB 5lom Chain B

Receptor sequence
>5lomB (length=250) Species: 176299 (Agrobacterium fabrum str. C58) [Search protein sequence]
HMDNPLGLIDPTTISVGTMGDAKPYAFTTADGNFTGFDIELFLNVAGRLG
FKKEQVVFTGQEFSALMPSVANGRFDVAAAAIGTTAKRKETVDFSDGYLA
GFLSVLTSEAGITDAAGLKGKRLGVVQGTLQEIYAEKNFAGTDLVKFPDN
NSAVSALNNGTVDAHFLDFEAAKDYSARYPALKIAVNIPSFDAPAGFVIR
KGNDALRNALDKGLKEAMQDGTWKKLHEKWFPGTPMPAAYLPKQHHHHHH
3D structure
PDB5lom Structural Basis for High Specificity of Amadori Compound and Mannopine Opine Binding in Bacterial Pathogens.
ChainB
Resolution1.5 Å
3D
structure
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Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 SNW B F96 A113 A114 G116 R121 A133 G134 T162 L163 Q164 D201 S223 A226 F63 A80 A81 G83 R88 A100 G101 T129 L130 Q131 D168 S190 A193
Gene Ontology
Molecular Function
GO:0015276 ligand-gated monoatomic ion channel activity
Biological Process
GO:0034220 monoatomic ion transmembrane transport
Cellular Component
GO:0016020 membrane
GO:0042597 periplasmic space

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Molecular Function
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Cellular Component
External links
PDB RCSB:5lom, PDBe:5lom, PDBj:5lom
PDBsum5lom
PubMed27609514
UniProtQ7D447

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