Structure of PDB 5log Chain B

Receptor sequence
>5logB (length=218) Species: 34 (Myxococcus xanthus) [Search protein sequence]
IHHVELTQSVLQYIRDSSVRDNDILRDLREETSKLPTMQIPPEQGQLLSL
LVRLIGARKTLEVGVFTGYSTLCTALALPADGRVIACDLSEEWVSIARRY
WQRAGVADRIEVRLGDAHHSLEALVGSEHRGTFDLAFIDADKESYDFYYE
HALRLVRPGGLIILDNTLWSGKVADPSVVGDPETDSLRRINAKLLTDERV
DLSMLPIADGLTLARKRK
3D structure
PDB5log Functional and structural characterisation of a bacterial O-methyltransferase and factors determining regioselectivity.
ChainB
Resolution2.01 Å
3D
structure
Catalytic site residues are labeled in the structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Catalytic site (original residue number in PDB) D142 K145 D168 N169
Catalytic site (residue number reindexed from 1) D139 K142 D165 N166
Enzyme Commision number ?
Interaction with ligand
Site
#
Ligand Ligand
chain
Binding residues on receptor
(original residue number in PDB)
Binding residues on receptor
(residue number reindexed from 1)
Binding affinity
BS01 MG B D142 D168 N169 D139 D165 N166
Gene Ontology
Molecular Function
GO:0008168 methyltransferase activity
GO:0008171 O-methyltransferase activity
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0032259 methylation

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:5log, PDBe:5log, PDBj:5log
PDBsum5log
PubMed27990630
UniProtQ50859

[Back to BioLiP]