Structure of PDB 5lo8 Chain B

Receptor sequence
>5lo8B (length=142) Species: 10116 (Rattus norvegicus) [Search protein sequence]
DIEERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKP
DMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDIGK
SNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNE
3D structure
PDB5lo8 Structural characterization of the Rabphilin-3A-SNAP25 interaction.
ChainB
Resolution2.5 Å
3D
structure
[Spin on]
[Spin off]
[Reset orientation]

[High quality]
[Low quality]

[White background]
[Black background]

[Download]
[Download structure with residue number starting from 1]
Enzymatic activity
Enzyme Commision number ?
Interaction with ligand
Site
#		 Ligand Ligand
chain		 Binding residues on receptor
(original residue number in PDB)		 Binding residues on receptor
(residue number reindexed from 1)		 Binding affinity
BS01 PIO B S618 A621 I648 S649 Y659 S82 A85 I112 S113 Y123
BS02 CA B D571 D577 D631 Y632 D633 D35 D41 D95 Y96 D97
BS03 CA B M570 D571 D631 D633 D639 M34 D35 D95 D97 D103
BS04 PIO B K581 K590 N638 K45 K54 N102
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:5lo8, PDBe:5lo8, PDBj:5lo8
PDBsum5lo8
PubMed28634303
UniProtP47709|RP3A_RAT Rabphilin-3A (Gene Name=Rph3a)

[Back to BioLiP]